Journal Cover Articles

Journal Publications

 43. Draz MS, KM Kochehbyoki, AVasan, D Battalapalli, A Sreeram, MK Kanakasabapathy, S Kallakuri, A Tsibris, DR Kuritzkes and H Shafiee, “DNA engineered micromotors powered by metal nanoparticles for motion based cellphone diagnostics”, Nature Communications, DOI: 10.1038/s41467-018-06727-8 , V9(1) , 4282, 2018

42. Thirumalaraju P, CL Bormann, M Kanakasabapathy, F Doshi, I Souter, I Dimitriadis, H Shafiee, “Automated sperm morpshology testing using artificial intelligence”, Fertility and Sterility, DOI: 10.1016/j.fertnstert.2018.08.039, V110(4), e432, 2018

41. Draz MS, NK Lakshminaraasimulu*, S Krishnakumar*, D Battalapalli*, A Vasan*, MK Kanakasabapathy, A Sreeram, S Kallakuri, P Thirumalaraju, Y Li, S Hua, XG  Yu, DR Kuritzkes, H Shafiee, 2018. Motion-Based Immunological Detection of Zika Virus Using Pt-Nanomotors and a Cellphone. ACS Nano 12, 5709–5718. doi:10.1021/acsnano.8b01515, V12(6), p5709-5718, 2018

40. Draz MS, M  Venkataramani , H  Lakshminarayanan, E  Saygl, M  Moazeni, A  Vasan, Y  Li, X  Sun, S  Hua, X  Yu and H Shafiee “Nanoparticle-enhanced electrical detection of Zika virus on paper microchip” Nanoscale, 2018, DOI: 10.1039/C8NR01646A, V10(25), p11841-11849 , 2018

39. Dimitriadis I, R Xu, MK Kanaksabapathy, P Thirumalaraju, V Yogesh, C Tanrikut, J Hsu, CL Bormann, H Shafiee “Automated measurement of sperm DNA fragmentation using a smartphone application” Fertility and Sterility DOI: 10.1016/j.fertnstert.2018.02.048, V109(3), e24 ,2018

38. Draz MS, H Shafiee “Applications of gold nanoparticles in virus detection”, Theranostics DOI:10.7150/thno.23856, V8(7), p1985-2017, 2018

37. Draz MS, M Moazeni, M Venkataramani, H Lakshminarayanan, E Saygili, NK Lakshminaraasimulu, KM Kochehbyoki, MK Kanakasabapathy, S Shabahang, A Vasan, MA Bijarchi, A Memic, H Shafiee “Hybrid Paper–Plastic Microchip for Flexible and High‐Performance Point‐of‐Care Diagnostics Advanced Functional Materials. DOI: 10.1002/adfm.201707161, V28(26), p1707161, 2018       

36. Kanakasabapathy M, P Thirumalaraju, V Yogesh, V Natarajan, CL Bormann, JC Petrozza, H Shafiee “Portable semen analyzer for automated, rapid measurement of sperm motility and concentration” Fertility and Sterility, DOI: 10.1016/j.fertnstert.2017.07.235, V108(3), e74-e75, 2017

35. Bormann CL, M Kanakasabapathy, P Thirumalaraju, V Yogesh, V Natarajan, J Demick, A Blanchard, JC Petrozza, H Shafiee, “Smartphone-based optical system for sperm viability testing” Fertility and Sterility, DOI: 10.1016/j.fertnstert.2017.07.234, V108(3), e74, 2017

34. Kanakasabapathy M, P Thirumalaraju, V Yogesh, V Natarajan, CL Bormann, P Bhowmick, C Veiga, JC Petrozza, H Shafiee “Automated smartphone-based system for semen assessment  through the hyaluronic binding assay” Fertility and Sterility, DOI: 10.1016/j.fertnstert.2017.07.233, V108(3), e74, 2017

33. Kanakasabapathy MK, HJ Pandya, MS Draz, MK Chug, M Sadasivam, S Kumar, B Etemad, V Yogesh, M Safavieh, W Asghar, JZ Li, AM Tsibris, DR Kuritzkes and H Shafiee, “Rapid, label-free CD4 testing using a smartphone compatible device” Lab on a chip, doi: 10.1039/C7LC00273D, V17, p2910-2919, 2017.

32. Yucha RW, KS Hobbs, E Hanhauser, LE Hogan, W Nieves, MO Ozen, F Inci, V York, EA Gibson, C Thanh, H Shafiee, RE Assal, M Kiselinova, YP Robles, H Bae, KS Leadabrand, SQ Wang, SG Deeks, DR Kuritzkes, U Demirci, TJ Henrich, “High-throughput Characterization of HIV-1 Reservoir Reactivation Using a Single-Cell-in-Droplet PCR Assay” EBioMedicine, doi: 10.1016/j.ebiom.2017.05.006, V20, p217-229, 2017.

31. Pandyaa HJ*, Kanakasabapathy MK*, S Verma, MK Chug, A Memic, M Gadjeva, H Shafiee, “Label-free electrical sensing of bacteria in eye wash samples: A step towards point-of-care detection of pathogens in patients with infectious keratitis” Biosensors and Bioelectronics, doi: 10.1016/j.bios.2016.12.035, V91, p32-9, 2017.

30. Coarsey CT, N Esiobu, R Narayanan, M Pavlovic, H Shafiee and W Asghar, “Strategies in Ebola virus disease (EVD) diagnostics at the point of care.” Critical Reviews in Microbiology, doi: 10.1080/1040841X.2017.1313814, V43(6), p779-798, 2017.

29. Safavieh M*, Pandya HJ*, M Venkataraman, P Thirumalaraju, MK Kanakasabapathy, A Singh, D Prabhakar, MK Chug and H Shafiee, “Rapid real-time antimicrobial susceptibility testing with electrical sensing on plastic microchips with printed electrodes.” ACS Applied Materials & Interfaces, doi: 10.1021/acsami.6b16571, V9(14), p12832–40, 2017.

28. Pandya HJ, K Dhingra, D Prabhakar, V Chandrasekar*, SK Natarajan*, AS Vasan, A Kulkarni andH Shafiee, “A microfluidic platform for drug screening in a 3D cancer microenvironment.” Biosensors and Bioelectronics, doi: 10.1016/j.bios.2017.03.054, V94, p632–42, 2017.

27. Kanakasabapathy MK, M Sadasivam*, A Singh*, C Preston, P Thirumalaraju, M Venkataraman, CL Bormann, MS Draz, JC Petrozza and H Shafiee, “An automated smartphone-based diagnostic assay for point-of-care semen analysis.” Science Translational Medicine, DOI: 10.1126/scitranslmed.aai7863, V9(382), eaai7863, 2017.

26. Draz MS, Y Wang, FF Chen, Y Xu and H Shafiee, “Electrically Oscillating Plasmonic Nanoparticles for Enhanced DNA Vaccine against Hepatitis C Virus” Advanced Functional Materials, doi:10.1002/adfm.201604139, V27(5), p1604139 2016.

25. Safavieh M, V Kaul, S Khetani, A Singh, K Dhingra, MK Kanakasabapathy, MS Draz, A Memic, DR Kuritzkes and H Shafiee, “Paper microchip with a graphene-modified silver nano-composite electrode for electrical sensing of microbial pathogens” Nanoscale, doi: 10.1039/C6NR06417E, V9(5), p1852-1861 2016.

24. Asghar W, H Shafiee, V Velasco, VR Sah, S Guo, RE Assal, F Inci, A Rajagopalan, M Jahangir, RM Anchan, GL Mutter, M Ozkan, CS Ozkan & U Demirci, “Toxicology Study of Single-walled Carbon Nanotubes and Reduced Graphene Oxide in Human Sperm” Scientific Reports, doi:10.1038/srep30270, V6,p30270 2016.

23. Habibi N, N Kamaly, A Memic, H Shafiee, “Self-assembled peptide-based nanostructures: Smart nanomaterials toward targeted drug delivery” Nano Today, doi:10.1016/j.nantod.2016.02.004, V4(1), p41-60, 2016.

22. Asghar W, M Yuksekkaya, H Shafiee, M Zhang, MO Ozen, F Inci, M Kocakulak, U Demirci, “Engineering long shelf life multi-layer biologically active surfaces on microfluidic devices for point of care applications.” Scientific Reports, doi:10.1038/srep21163, V6, 21163, 2016.

21. Safavieh M, C Coarsey, N Esiobu, A Memic, J Mahesh Vyas, H Shafiee and W Asghar “Advances in Candida detection platforms for clinical and point-of-care applications” Critical Reviews in Biotechnology, doi: 10.3109/07388551.2016.1167667, V37(4), p441-458 2016.

20. Safavieh M, MK Kanakasabapathy, F Tarlan, MU Ahmed, M Zourob, W Asghar and H Shafiee, “Emerging Loop-Mediated Isothermal Amplification-Based Microchip and Microdevice Technologies for Nucleic Acid Detection.” ACS Biomaterials Science & Engineering, doi: 10.1021/acsbiomaterials.5b00449, V2(3), p278-294, 2016

19. Safavieh M, S Khetani, F Juillard, V Kaul, MK Kanakasabapathy, KM Kaye and H Shafiee, “Electrical response of a B lymphoma cell line latently infected with Kaposi’s sarcoma herpesvirus.” Biosensors and Bioelectronics, doi:10.1016/j.bios.2016.01.060, V80, p230-236, 2016.

18. Asghar W, R Assal, H Shafiee, S Pitteri, R Paulmurugan, U Demirci, “Engineering cancer microenvironments for in vitro 3-D tumor models”, Scientific Reports, doi: 1038/srep08719, V5, e8719, 2015.

17. Shafiee H, MK Kanakasabapathy, F Juillard, M Keser, M Sadasivam, M Yuksekkaya, E Hanhauser, TJ Henrich, DR Kuritzkes, KM Kaye, U Demirci, “Printed flexible plastic microchip for viral load measurement through quantitative detection of viruses in plasma and saliva”, Scientific Reports, doi:10.1038/srep09919, V5, e9919, 2015.

16. Tokel O, UH Yildiz, F Inci, NG Durmus, OO Ekiz, B Turker, C Cetin, S Rao, K Sridhar, N Natarajan, H Shafiee, A Dana, U Demirci, “Portable microfluidic integrated plasmonic platform for pathogen detection”, Scientific Reports, doi:10.1038/srep09152, V5, e9152, 2015.

15. Shafiee H, S Wang, F Inci, M Toy, TJ Henrich, DR Kuritzkes, U Demirci, “Emerging technologies for point-of-care management of HIV infection”, Annual Review of Medicine, doi: 10.1146/annurev-med-092112-143017,V66, p387-405, 2015.

14. Asghar W, R El Assal, H Shafiee, R Anchan, U Demirci, “Preserving human cells for regenerative, reproductive, and transfusion medicine”, Biotechnology Journal, doi:10.1002/biot.201300074, V9 (7), p895-903, 2014.

13. Asghar W, V Velasco, JL Kingsley, MS Shoukat, H Shafiee, RM Anchan, GL Mutter, E Tüzel, U Demirci, “Selection of functional human sperm with higher DNA integrity and fewer reactive oxygen species”, Advanced Healthcare Materials, doi: 10.1002/adhm.201400058, V3(10), 1671-1679, 2014.

12. El Assal R, UA Gurkan, S Guven, I Gozen, H Shafiee et. al. “Bio-inspired cryo-ink preserves red blood cell phenotype and function during nanoliter vitrification”, Advanced Materials, doi: 10.1002/adma.201400941, V26(33), p5815-5822, 2014.

11. Shafiee H, EA Lidstone, M Jahangir, F Inci, E Hanhauser, TJ Henrich, DR Kuritzkes, B Cunningham, U Demirci, “Nanostructured optical photonic crystal biosensor for HIV viral load measurement”, Scientific Reports,doi: 10.1038/srep04116, V4, 4116, 2014.

10. Shafiee H, M Jahangir, F Inci, S Wang, RBB Willenbrecht, FF Giguel, AMN Tsibris, DR Kuritzkes, U Demirci, “Acute on-chip HIV detection through label-free electrical sensing of viral nano-lysate”, Small, doi: 10.1002/smll.201202195, V9 (15), p2553-2563, 2013. [Cover, Highlighted in Lab-Chip]

9. Salmanzadeh A, L Romero, H Shafiee, RC Gallo-Villanueva, MA Stremler, SD Cramer, RV Davalos, “Isolation of prostate Tumor Initiating Cells (TICs) through their dielectrophoretic signature”, Lab on a Chip, doi:10.1039/C1LC20701F,  V12 (1), p182-9, 2012.

8. Salmanzadeh A, H Shafiee, RV Davalos, MA Stremler, “Microfluidic mixing enhancement using contactless dielectrophoresis”, Electrophoresis, doi:10.1002/elps.201100171, V32 (18), p2569-2578, 2011. [Cover]

7. Welsh J D, A Salmanzadeh-Dosdabi, KE Drahos, H Shafiee, MA Stremler, RV Davalos, DGS Capelluto, CV Finkielstein, “Disabled-2 negative regulates homotypic and heterotypic platelet aggregation by binding to sulfatides”, Journal of Haematology, doi:10.1111/j.1365-2141.2011.08705.x, V54(1), p122-133, 2011.

6. Shafiee H, MB Sano, E Henslee, JL Caldwell, RV Davalos, “Selective isolation of live-dead cells using contactless dielectrophoresis (cDEP)”, Lab on a Chip, doi:10.1039/B920590J, V10(4), p438-445, 2010. [Cover, Featured in Highlights in Chemical Biology. The most accessed and downloaded article in February 2010]

5. Shafiee H, JL Caldwell, RV Davalos “A microfluidic system for biological particle enrichment utilizing contactless dielectrophoresis (cDEP)”, Journal of the Association for Laboratory Automation (JALA), doi:10.1016/j.jala.2010.02.003, V10 (3), p224-232, 2010.

4. Shafiee H, JL Caldwell, MB Sano, RV Davalos, “Contactless dielectrophoresis: a new technique for cell manipulation”, Biomedical Microdevices, doi: 10.1007/s10544-009-9317-5, V11(5), p997-1006, 2009.

3. Shafiee H, PA Garcia, RV Davalos, “A preliminary study to delineate irreversible electroporation (IRE) from thermal damage using the Arrhenius equation”, Journal of Biomechanical Engineering, doi:10.1115/1.3143027,  V131(7), p074509(5 pages), 2009.

2. Shafiee H, MH Naei, MR Eslami, “Mechanical in-plane and out-of-plane buckling of arches made of FGM”, International Journal of Mechanical Science, doi:10.1016/j.ijmecsci.2006.01.001, V48 (8), p907-915, 2006.

1. Rastgoo A, H Shafiee, A Allahverdizadeh, “Instability of curved beams made of FGM under thermal loading”, International Journal of Mechanics and Material in Design,DOI 10.1007/s10999-005-4446-3,  V2(1-2), p117-128, 2006.

* indicates authors with equal contribution